29 results found Sort:

lmcinnes
umap lmcinnes
807
7.4k
bsd-3-clause
127
Uniform Manifold Approximation and Projection
umap visualization machine-learning dimensionality-reduction topological-data-analysis
Created 2017-07-02
1,857 commits to master branch, last one 2 days ago
giotto-ai
giotto-tda giotto-ai
174
854
other
13
A high-performance topological machine learning toolbox in Python
tda mapper topology scikit-learn machine-learning computational-topology topological-data-analysis topological-machine-learning
Created 2019-10-15
2,116 commits to master branch, last one 5 months ago
scikit-tda
kepler-mapper scikit-tda
183
632
mit
40
Kepler Mapper: A flexible Python implementation of the Mapper algorithm.
tda python hacktoberfest kepler-mapper visualization mapper-algorithm data-visualization topological-data-analysis
Created 2015-08-20
631 commits to master branch, last one 4 months ago
scikit-tda
scikit-tda scikit-tda
55
526
other
18
Topological Data Analysis for Python🐍
tda mapper homology topology scikit-tda tda-python tda-libraries topological-data-analysis
Created 2018-04-13
70 commits to master branch, last one 3 months ago
topology-tool-kit
ttk topology-tool-kit
124
418
other
26
TTK - Topological Data Analysis and Visualization - Source Code
vtk python paraview c-plus-plus visualization topological-data-analysis
Created 2017-03-05
8,245 commits to dev branch, last one about a month ago
Ripser
ripser Ripser
75
311
mit
25
Ripser: efficient computation of Vietoris–Rips persistence barcodes
persistent-homology computational-topology topological-data-analysis
Created 2015-10-27
425 commits to master branch, last one about a year ago
scikit-tda
ripser.py scikit-tda
61
277
other
15
A Lean Persistent Homology Library for Python
tda ripser homology topology data-science persistent-homology topological-data-analysis
Created 2017-07-03
729 commits to master branch, last one 27 days ago
GUDHI
gudhi-devel GUDHI
66
258
mit
11
The GUDHI library is a generic open source C++ library, with a Python interface, for Topological Data Analysis (TDA) and Higher Dimensional Geometry Understanding.
tda cpp17 python topology persistent-homology topological-data-analysis
Created 2019-03-07
6,977 commits to master branch, last one 14 days ago
erdogant
findpeaks erdogant
28
238
other
8
The detection of peaks and valleys in a 1d-vector or 2d-array (image)
sar mask mesh sonar topology peak-analysis speckle-noise peak-detection denoising-images 3d-reconstruction topological-data-analysis
Created 2020-05-01
377 commits to master branch, last one 2 months ago
pyt-team
TopoModelX pyt-team
81
234
mit
12
Topological Deep Learning
cxn cw-complex cw-networks tensor-diagrams higher-order-models hypergraph-learning cell-neural-networks cell-complex-networks graph-neural-networks higher-order-networks cellular-message-passing topological-data-analysis topological-deep-learning hypergraph-neural-networks simplicial-message-passing simplicial-neural-networks topological-message-passing topological-neural-networks cell-complex-neural-networks higher-order-message-passing
Created 2022-07-12
1,188 commits to main branch, last one 10 days ago
pyt-team
TopoNetX pyt-team
33
178
mit
10
Computing on Topological Domains
cw-complex cw-networks cell-complexes tensor-diagrams cellular-complex simplicial-complex cw-complex-networks topological-learning combinatorial-complex higher-order-networks heterogeneous-hypergraph topological-data-analysis topological-deep-learning hypergraph-neural-networks simplicial-neural-networks topological-message-passing topological-neural-networks cell-complex-neural-networks higher-order-message-passing
Created 2022-08-09
1,265 commits to main branch, last one 17 days ago
FatemehTarashi
awesome-tda FatemehTarashi
21
166
cc0-1.0
10
A curated list of topological data analysis (TDA) resources and links.
tda awesome awesome-list machine-learning topological-data-analysis
Created 2018-09-10
64 commits to master branch, last one about a month ago
aidos-lab
pytorch-topological aidos-lab
21
156
bsd-3-clause
5
A topological machine learning framework based on PyTorch
pytorch deep-learning topological-data-analysis topological-machine-learning
Created 2021-12-12
373 commits to main branch, last one 2 months ago
dillondaudert
UMAP.jl dillondaudert
18
130
mit
8
Uniform Manifold Approximation and Projection (UMAP) implementation in Julia
umap julia visualization machine-learning dimensionality-reduction topological-data-analysis
Created 2018-09-13
241 commits to master branch, last one 9 months ago
stephenhky
MoguTDA stephenhky
26
116
mit
8
Topological Data Analysis in Python: Simplicial Complex
tda python package homology topology topological-data-analysis
Created 2018-06-11
143 commits to master branch, last one 26 days ago
hyungkwonko
umato hyungkwonko
12
107
mit
7
Uniform Manifold Approximation with Two-phase Optimization (IEEE VIS 2022 short)
umap umato visualization dimensionality-reduction topological-data-analysis
Created 2020-06-20
269 commits to master branch, last one 3 months ago
LAIT-CVLab
TopPR LAIT-CVLab
4
104
mit
0
NeurIPS 2023 - TopP&R: Robust Support Estimation Approach for Evaluating Fidelity and Diversity in Generative Models Official Code
generative-model evaluation-metrics topological-data-analysis
Created 2023-09-22
78 commits to main branch, last one 3 months ago
Pseudomanifold
Aleph Pseudomanifold
17
101
mit
8
A library for exploring persistent homology
persistence c-plus-plus-11 machine-learning persistent-homology topological-data-analysis
Created 2016-11-30
2,212 commits to master branch, last one about a year ago
hanssmail
quantQ hanssmail
45
80
gpl-3.0
27
The repository for the Machine Learning and Big Data with kdb+/q book by Novotny et al.
kdb kdb-q algorithm bioinformatics machine-learning quantum-computing deep-neural-networks mathematical-functions topological-data-analysis
Created 2019-04-26
86 commits to master branch, last one 8 months ago
rivetTDA
rivet rivetTDA
24
74
gpl-3.0
12
RIVET is a tool for Topological Data Analysis, in particular two-parameter persistent homology.
data-science algebraic-topology data-visualization persistent-homology topological-data-analysis
Created 2017-03-28
1,056 commits to master branch, last one about a year ago
stefaniaebli
simplicial_neural_networks stefaniaebli
8
73
mit
6
Simplicial neural networks (SNNs), a generalization of graph neural networks to data that live on a class of topological spaces called simplicial complexes.
laplacian deep-learning graph-neural-networks geometric-deep-learning topological-data-analysis convolutional-neural-networks
Created 2020-10-21
79 commits to main branch, last one 3 years ago
mtsch
Ripserer.jl mtsch
7
64
mit
3
Flexible and efficient persistent homology computation.
tda julia ripser homology topology cohomology persistent-homology topological-data-analysis
Created 2020-04-09
218 commits to master branch, last one 5 months ago
multinetlab-amsterdam
network_TDA_tutorial multinetlab-amsterdam
22
63
gpl-3.0
4
This repository is dedicated for the tutorial on network and topological neuroscience.
tda fmri graph-theory neuroimaging neuroscience topological-data-analysis
Created 2020-12-14
62 commits to main branch, last one 9 months ago
c-hofer
torchph c-hofer
10
61
mit
6
The essence of my research, distilled for reusability. Enjoy 🥃!
gpu pytorch deep-learning persistent-homology topological-data-analysis differentiable-persistent-homology
Created 2017-10-13
277 commits to master branch, last one 2 months ago
BorgwardtLab
P-WL BorgwardtLab
17
60
mit
6
A Persistent Weisfeiler–Lehman Procedure for Graph Classification
graph-kernels machine-learning weisfeiler-lehman persistent-homology graph-classification topological-data-analysis
Created 2018-10-23
401 commits to master branch, last one 3 years ago
giotto-ai
giotto-ph giotto-ai
12
43
other
6
High performance implementation of Vietoris-Rips persistence.
topology machine-learning computational-topology topological-data-analysis
Created 2020-11-30
220 commits to main branch, last one 5 months ago
marrlab
SHAPR_torch marrlab
10
39
bsd-3-clause
5
SHAPR: Code for "Capturing Shape Information with Multi-Scale Topological Loss Terms for 3D Reconstruction"
pytorch segmentation deep-learning cubical-complexes persistent-homology image-reconstruction topological-data-analysis topological-machine-learning
Created 2022-03-03
252 commits to master branch, last one about a year ago
aidos-lab
TARDIS aidos-lab
4
39
bsd-3-clause
2
TARDIS: Topological Algorithms for Robust DIscovery of Singularities
icml-2023 anomaly-detection singularity-detection topological-data-analysis topological-machine-learning
Created 2022-08-16
173 commits to main branch, last one about a year ago
LuisScoccola
persistable LuisScoccola
2
35
bsd-3-clause
7
density-based clustering for exploratory data analysis based on multi-parameter persistence
clustering cluster-analysis machine-learning clustering-algorithm unsupervised-learning topological-data-analysis machine-learning-algorithms
Created 2021-07-07
220 commits to main branch, last one 2 months ago