3 results found Sort:

YaqiangCao
cLoops YaqiangCao
17
109
mit
15
Accurate and flexible loops calling tool for 3D genomic data.
ngs hi-c tool dbscan hichip python stripes chia-pet pipeline 3d-genome algorithm clustering sequencing example-data trac-looping loops-calling bioinformatics chromatin-loops chromatin-stripes chromatin-interaction
Created 2017-06-26
143 commits to master branch, last one 2 years ago
ay-lab
mustache ay-lab
11
63
mit
5
Multi-scale Detection of Chromatin Loops from Hi-C and Micro-C Maps using Scale-Space Representation
hi-c micro-c genomics chromatin-loops
Created 2020-02-19
205 commits to master branch, last one 6 months ago
koszullab
chromosight koszullab
9
62
other
14
Computer vision based program for pattern recognition in chromosome (Hi-C) contact maps
hi-c genomics chromatin-loops pattern-detection
Created 2019-07-10
697 commits to master branch, last one about a year ago