7 results found Sort:

opencobra
cobrapy opencobra
218
465
gpl-2.0
37
COBRApy is a package for constraint-based modeling of metabolic networks.
flux sbml cobra python modeling metabolism sbml-model cell-design biochemistry bioinformatics sbml-simulation systems-biology metabolic-models metabolic-network strain-engineering computational-biology
Created 2012-11-02
2,738 commits to devel branch, last one about a month ago
franciscozorrilla
metaGEM franciscozorrilla
42
203
mit
5
:gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data
mags snakemake metabolism microbiome metagenomics bioinformatics gut-microbiome systems-biology metabolic-models microbial-ecology metabolic-modeling computational-biology flux-balance-analysis genome-scale-metabolic-model metagenome-assembled-genomes
Created 2018-06-14
669 commits to master branch, last one 3 months ago
cdanielmachado
carveme cdanielmachado
53
158
other
7
CarveMe: genome-scale metabolic model reconstruction
python modeling metabolism genome-scale reconstruction
Created 2017-07-26
163 commits to master branch, last one 2 months ago
changwn
scFEA changwn
33
99
other
1
single cell Flux Estimation Analysis (scFEA) Try the below web server!
scrna-seq metabolism single-cell metabolic-modules
Created 2020-06-14
112 commits to master branch, last one about a year ago
cdanielmachado
reframed cdanielmachado
15
56
other
4
ReFramed: metabolic modeling package
python modeling metabolism
Created 2019-10-01
139 commits to master branch, last one 2 months ago
biosustain
shu biosustain
1
44
apache-2.0
3
Multi-dimensional, trans-omics metabolic maps.
metabolism visualization systems-biology
Created 2022-11-21
229 commits to master branch, last one 7 months ago
pub-calculator-io
bmr-calculator pub-calculator-io
2
6
unknown
0
Free WordPress Plugin: Free BMR calculator uses well-known algorithms to calculate the basal metabolic rate. Also, find out more about the factors that influence BMR. www.calculator.io/bmr-calculator/
bmr plugin wordpress calculator metabolism bmr-calculator metabolic-rate wordpress-plugin calculator-plugin online-calculator basalmetabolicrate basal-metabolic-rate basal-rate-calculation basal-metabolic-rate-calculator
Created 2023-06-10
26 commits to master branch, last one 5 months ago