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COBRApy is a package for constraint-based modeling of metabolic networks.
Created
2012-11-02
2,731 commits to devel branch, last one 2 months ago
The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:
Created
2012-11-02
8,912 commits to master branch, last one 4 months ago
:gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data
Created
2018-06-14
665 commits to master branch, last one 5 months ago
Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks
Created
2017-11-01
1,390 commits to master branch, last one 3 days ago
memote – the genome-scale metabolic model test suite
Created
2016-05-13
893 commits to develop branch, last one 5 months ago
The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.
Created
2016-04-05
1,951 commits to main branch, last one about a month ago
The consensus GEM for Saccharomyces cerevisiae
Created
2016-02-29
1,002 commits to main branch, last one about a month ago
Python package to study microbial communities using metabolic modeling.
Created
2017-02-14
784 commits to main branch, last one 11 days ago
Infer metabolic directions from moment differences of mass-weighted intensity distributions
Created
2023-11-25
23 commits to main branch, last one 4 months ago
From annotated genomes to metabolic screening in large scale microbiotas
Created
2019-03-14
560 commits to main branch, last one 2 months ago