4 results found Sort:

cafferychen777
ggpicrust2 cafferychen777
13
115
mit
2
Make Picrust2 Output Analysis and Visualization Easier
16s-rrna picrust2 tax4fun2 microbiome microbiota metagenomics visualization functional-data metagenomic-analysis
Created 2022-12-17
284 commits to main branch, last one 24 days ago
microsud
Tools-Microbiome-Analysis microsud
46
112
unknown
12
A list of R environment based tools for microbiome data exploration, statistical analysis and visualization
16s-rrna amplicon microbiota metagenomics microbiome-data amplicon-sequencing microbiome-analysis microbial-communities
Created 2017-08-08
169 commits to master branch, last one about a year ago
david-barnett
microViz david-barnett
11
107
gpl-3.0
6
R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
r rstats microbiome microbiota microbiome-analysis
Created 2020-10-25
881 commits to main branch, last one 5 days ago
micom-dev
micom micom-dev
18
94
apache-2.0
5
Python package to study microbial communities using metabolic modeling.
flux cobra python cobrapy modeling community microbiome microbiota biochemistry hacktoberfest systems-biology metabolic-models
Created 2017-02-14
813 commits to main branch, last one 10 days ago