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3

67

apache-2.0

4

Efficient implementations of Needleman-Wunsch and other sequence alignment algorithms written in Rust with Python bindings via PyO3.

nlp pyo3 rust python hirschberg bioinformatics needleman-wunsch sequence-alignment natural-language-processing

Created 2023-04-05

18 commits to main branch, last one 3 months ago

cmpgpx jonblack

21

62

unlicense

6

Show the differences between GPX files

gpx alignment needleman-wunsch

Created 2015-04-05

2 commits to master branch, last one 9 years ago

SneakySnake CMU-SAFARI

11

49

gpl-3.0

9

SneakySnake:snake: is the first and the only pre-alignment filtering algorithm that works efficiently and fast on modern CPU, FPGA, and GPU architectures. It greatly (by more than two orders of magnit...

gpu fpga edlib minimap2 long-reads short-reads smith-waterman needleman-wunsch sequence-aligner sequence-alignment wavefront-alignment hardware-accelerator pre-alignment-filtering

Created 2019-09-22

73 commits to master branch, last one about a year ago