3 results found Sort:

biowasm
biowasm biowasm
18
197
mit
10
WebAssembly modules for genomics
jq awk sed grep seqtk bowtie2 bedtools genomics minimap2 samtools javascript webassembly bioinformatics
Created 2019-09-07
1,180 commits to main branch, last one 7 days ago
jguhlin
minimap2-rs jguhlin
11
51
other
7
Rust bindings to minimap2 library
ffi rust genomics longread minimap2 alignment bioinformatics spliced-alignment sequence-alignment
Created 2022-09-30
379 commits to main branch, last one 23 days ago
CMU-SAFARI
SneakySnake CMU-SAFARI
11
46
gpl-3.0
9
SneakySnake:snake: is the first and the only pre-alignment filtering algorithm that works efficiently and fast on modern CPU, FPGA, and GPU architectures. It greatly (by more than two orders of magnit...
gpu fpga edlib minimap2 long-reads short-reads smith-waterman needleman-wunsch sequence-aligner sequence-alignment wavefront-alignment hardware-accelerator pre-alignment-filtering
Created 2019-09-22
73 commits to master branch, last one about a year ago