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13

181

mit

6

Accurate metagenomic profiling && Fast large-scale sequence/genome searching

cobs kmer bigsi sketch virome syncmers searching sketching fracminhash metagenomics scaled-minhash taxonomic-profiling taxonomic-classification

Created 2020-10-30

522 commits to main branch, last one about a year ago

7

55

mit

2

Cenote-Taker2: Discover and Annotate Divergent Viral Contigs (Please use Cenote-Taker 3 instead)

virus virome genbank hhblits hallmark hhsearch prophage discovery annotation metagenomes cenote-taker2 virus-discovery virus-evolution virus-sequences prophage-prediction cenote-unlimited-breadsticks

Created 2019-09-12

337 commits to master branch, last one 9 months ago

12

54

mit

5

hecatomb is a virome analysis pipeline for analysis of Illumina sequence data

virome snakemake viral-metagenomes

Created 2019-10-14

894 commits to main branch, last one 8 months ago