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sourmash-bio
sourmash sourmash-bio
80
482
other
17
Quickly search, compare, and analyze genomic and metagenomic data sets.
kmer rust python minhash sourmash sketching fracminhash hacktoberfest bioinformatics scaled-minhash taxonomic-profiling taxonomic-classification
Created 2016-04-09
2,098 commits to latest branch, last one 2 days ago
shenwei356
kmcp shenwei356
13
182
mit
6
Accurate metagenomic profiling && Fast large-scale sequence/genome searching
cobs kmer bigsi sketch virome syncmers searching sketching fracminhash metagenomics scaled-minhash taxonomic-profiling taxonomic-classification
Created 2020-10-30
522 commits to main branch, last one about a year ago
shenwei356
bio shenwei356
9
92
mit
7
A lightweight and high-performance bioinformatics package in Golang
golang package syncmer taxdump sequence taxonomy minimizer bioinformatics scaled-minhash
Created 2013-03-12
253 commits to master branch, last one 3 months ago