nf-core / viralrecon

Assembly and intrahost/low-frequency variant calling for viral samples

Date Created 2020-03-30 (5 years ago)

Commits 2,788 (last one 2 years ago)

Stargazers 137 (0 this week)

Watchers 123 (0 this week)

Forks 131

License mit

Ranking

RepositoryStats indexes 665,059 repositories, of these nf-core/viralrecon is ranked #255,093 (62nd percentile) for total stargazers, and #13,855 for total watchers. Github reports the primary language for this repository as Nextflow, for repositories using this language it is ranked #19/94.

nf-core/viralrecon is also tagged with popular topics, for these it's ranked: workflow (#408/794), pipeline (#203/472), assembly (#200/427), covid-19 (#122/317), virus (#47/116), covid19 (#42/115)

Other Information

nf-core/viralrecon has 10 open pull requests on Github, 253 pull requests have been merged over the lifetime of the repository.

Github issues are enabled, there are 31 open issues and 156 closed issues.

There have been 11 releases, the latest one was published on 2023-03-23 (2 years ago) with the name nf-core/viralrecon v2.6.0 - Rhodium Raccoon.

Homepage URL: https://nf-co.re/viralrecon

All Topics

ont artic viral virus covid19 nf-core amplicon assembly covid-19 illumina nanopore nextflow pipeline workflow sars-cov-2 metagenomics oxford-nanopore variant-calling long-read-sequencing

Star History

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Watcher History

Github watchers over time, collection started in '23

Recent Commit History

494 commits on the default branch (master) since jan '22

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Issue History

Languages

The primary language is Nextflow but there's also others...

updated: 2025-06-16 @ 06:49am, id: 251281432 / R_kgDODvpAGA