Search Results - RepositoryStats

readfish LooseLab

35

176

gpl-3.0

13

CLI tool for flexible and fast adaptive sampling on ONT sequencers

ont genomics sequencing bioinformatics oxford-nanopore adaptive-sampling

Created 2019-11-08

407 commits to main branch, last one about a month ago

viralrecon nf-core

119

133

mit

109

Assembly and intrahost/low-frequency variant calling for viral samples

ont artic viral virus covid19 nf-core amplicon assembly covid-19 illumina nanopore nextflow pipeline workflow sars-cov-2 metagenomics oxford-nanopore variant-calling long-read-sequencing

Created 2020-03-30

2,788 commits to master branch, last one about a year ago

ClairS HKU-BAL

8

82

bsd-3-clause

6

ClairS - a deep-learning method for long-read somatic small variant calling

ont snvs indels pacbio phasing genomics illumina nanopore haplotypes long-reads short-reads deep-learning bioinformatics somatic-variants somatic-mutations long-read-sequencing

Created 2021-07-29

763 commits to main branch, last one 23 days ago

ClairS-TO HKU-BAL

4

59

bsd-3-clause

3

ClairS-TO - a deep-learning method for tumor-only somatic variant calling

ont snvs pacbio tumors genomics illumina nanopore variants long-reads tumor-only deep-learning bioinformatics variant-calling somatic-variants somatic-mutations long-read-sequencing

Created 2023-11-07

182 commits to main branch, last one 3 days ago

Exploit-HS8545M-ONT 0neday

18

42

unknown

3

Exploit Huawei ONT device, only support r019. You need to compile kernel module getshell.ko for r018 or r017 by yourself.

ont expoit huawei hs8145v5 hs8545m5

Created 2021-05-15

34 commits to main branch, last one 2 years ago

pod5Viewer dietvin

1

26

gpl-3.0

2

GUI for inspecting POD5 files

gui ont pod5 nanopore nanopore-sequencing

Created 2024-06-04

203 commits to main branch, last one 3 months ago