Search Results - RepositoryStats

30

162

gpl-3.0

14

CLI tool for flexible and fast adaptive sampling on ONT sequencers

ont genomics sequencing bioinformatics oxford-nanopore adaptive-sampling

Created 2019-11-08

400 commits to main branch, last one about a month ago

103

111

mit

101

Assembly and intrahost/low-frequency variant calling for viral samples

ont artic viral virus covid19 nf-core amplicon assembly covid-19 illumina nanopore nextflow pipeline workflow sars-cov-2 metagenomics oxford-nanopore variant-calling long-read-sequencing

Created 2020-03-30

2,788 commits to master branch, last one about a year ago

5

58

bsd-3-clause

5

ClairS - a deep-learning method for long-read somatic small variant calling

ont snvs indels pacbio phasing genomics illumina nanopore haplotypes long-reads short-reads deep-learning bioinformatics somatic-variants somatic-mutations long-read-sequencing

Created 2021-07-29

691 commits to main branch, last one a day ago

3

37

bsd-3-clause

2

ClairS-TO - a deep-learning method for tumor-only somatic variant calling

ont snvs pacbio tumors genomics illumina nanopore variants long-reads tumor-only deep-learning bioinformatics variant-calling somatic-variants somatic-mutations long-read-sequencing

Created 2023-11-07

110 commits to main branch, last one about a month ago