pirovc / ganon

ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more

Date Created 2018-08-30 (6 years ago)

Commits 690 (last one 9 months ago)

Stargazers 87 (0 this week)

Watchers 4 (0 this week)

Forks 13

License mit

Ranking

RepositoryStats indexes 584,353 repositories, of these pirovc/ganon is ranked #318,904 (45th percentile) for total stargazers, and #373,290 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #59,330/116,326.

pirovc/ganon is also tagged with popular topics, for these it's ranked: bioinformatics (#454/789)

Other Information

pirovc/ganon has Github issues enabled, there are 3 open issues and 64 closed issues.

There have been 32 releases, the latest one was published on 2024-02-12 (9 months ago) with the name ganon version 2.1.0.

Homepage URL: https://pirovc.github.io/ganon/

All Topics

gtdb ncbi k-mer refseq genbank taxonomy microbiome minimizers bloom-filter metagenomics bioinformatics

Star History

Github stargazers over time

Watcher History

Github watchers over time, collection started in '23

Recent Commit History

118 commits on the default branch (master) since jan '22

Yearly Commits

Commits to the default branch (master) per year

Issue History

Languages

The primary language is Python but there's also others...

updated: 2024-11-14 @ 02:45am, id: 146760061 / R_kgDOCL9hfQ