pirovc / ganon

ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more

Date Created 2018-08-30 (6 years ago)

Commits 690 (last one 10 months ago)

Stargazers 92 (0 this week)

Watchers 4 (0 this week)

Forks 13

License mit

Ranking

RepositoryStats indexes 595,856 repositories, of these pirovc/ganon is ranked #311,344 (48th percentile) for total stargazers, and #377,401 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #58,202/119,431.

pirovc/ganon is also tagged with popular topics, for these it's ranked: bioinformatics (#438/814)

Other Information

pirovc/ganon has Github issues enabled, there are 3 open issues and 68 closed issues.

There have been 32 releases, the latest one was published on 2024-02-12 (10 months ago) with the name ganon version 2.1.0.

Homepage URL: https://pirovc.github.io/ganon/

All Topics

gtdb ncbi k-mer refseq genbank taxonomy microbiome minimizers bloom-filter metagenomics bioinformatics

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118 commits on the default branch (master) since jan '22

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The primary language is Python but there's also others...

updated: 2024-12-20 @ 06:52am, id: 146760061 / R_kgDOCL9hfQ