pirovc / ganon

ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more

Date Created 2018-08-30 (6 years ago)

Commits 690 (last one about a year ago)

Stargazers 95 (0 this week)

Watchers 4 (0 this week)

Forks 13

License mit

Ranking

RepositoryStats indexes 622,749 repositories, of these pirovc/ganon is ranked #314,167 (50th percentile) for total stargazers, and #383,782 for total watchers. Github reports the primary language for this repository as Python, for repositories using this language it is ranked #59,260/126,369.

pirovc/ganon is also tagged with popular topics, for these it's ranked: bioinformatics (#443/839)

Other Information

pirovc/ganon has Github issues enabled, there are 2 open issues and 70 closed issues.

There have been 32 releases, the latest one was published on 2024-02-12 (about a year ago) with the name ganon version 2.1.0.

Homepage URL: https://pirovc.github.io/ganon/

All Topics

gtdb ncbi k-mer refseq genbank taxonomy microbiome minimizers bloom-filter metagenomics bioinformatics

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118 commits on the default branch (master) since jan '22

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The primary language is Python but there's also others...

updated: 2025-02-06 @ 06:10pm, id: 146760061 / R_kgDOCL9hfQ