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LLM-based ontological extraction tools, including SPIRES
Created
2023-01-03
1,905 commits to main branch, last one a day ago
Repository for the Human Disease Ontology.
Created
2015-09-23
3,901 commits to main branch, last one 2 days ago
Ontology for the description of human clinical features
Created
2015-08-19
8,125 commits to master branch, last one 2 days ago
BFO repository including source code and latest documents
Created
2015-07-09
925 commits to master branch, last one 10 months ago
ROBOT is an OBO Tool
Created
2015-01-31
2,351 commits to master branch, last one 8 days ago
Mondo Disease Ontology
Created
2017-09-20
11,968 commits to master branch, last one a day ago
Bootstrap an OBO Library ontology
Created
2015-12-15
2,157 commits to master branch, last one 5 days ago
A Python frontend to (Open Biomedical) Ontologies.
Created
2016-07-01
837 commits to master branch, last one 3 months ago
Source ontology files for the Gene Ontology
Created
2015-06-19
22,110 commits to master branch, last one 23 hours ago
The core repository for the FOODON food ontology project. This holds the key classes of the ontology; larger files and the results of text-mining projects will be stored in other repos.
Created
2016-03-17
1,364 commits to master branch, last one 2 months ago
Schema and generated objects for biolink data model and upper ontology
Created
2017-12-04
3,433 commits to master branch, last one about a month ago
PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
Created
2018-09-22
1,983 commits to master branch, last one 8 months ago
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
Created
2015-07-29
4,352 commits to master branch, last one 4 days ago
Simple Standard for Sharing Ontology Mappings
Created
2020-04-15
366 commits to master branch, last one a day ago
An ontology of cell types
Created
2015-06-04
4,069 commits to master branch, last one a day ago
A community-driven ontology for the representation of environments
Created
2015-03-28
2,152 commits to master branch, last one 10 days ago
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
Created
2010-03-16
5,604 commits to master branch, last one 2 days ago
Ontology Access Kit: A python library and command line application for working with ontologies
Created
2022-03-28
617 commits to main branch, last one 2 months ago
python library for working with ontologies and ontology associations
Created
2017-04-18
1,987 commits to master branch, last one 5 days ago
Ontology Lookup Service from SPOT at EBI
This repository has been archived
(exclude archived)
Created
2014-11-03
838 commits to dev branch, last one about a year ago
OBO Organized Knowledge: Training materials for becoming an OBO engineer
Created
2020-06-03
2,103 commits to master branch, last one 2 days ago
Collect of SO Ontologies
Created
2015-06-17
211 commits to master branch, last one about a month ago
RO is an ontology of relations for use with biological ontologies
Created
2015-07-03
1,272 commits to master branch, last one 19 days ago
OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
Created
2019-01-26
561 commits to master branch, last one about a year ago
information artifact ontology
Created
2015-07-31
915 commits to master branch, last one 8 months ago
The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
Created
2015-08-19
1,866 commits to master branch, last one 9 days ago
A system for managing OBO PURLs
Created
2014-11-26
2,139 commits to master branch, last one 7 days ago
The Ontology for Biomedical Investigations
Created
2017-02-27
1,824 commits to master branch, last one 9 days ago
LLM-driven curation assist tool
Created
2023-05-27
326 commits to main branch, last one 10 days ago
Ontology for consent codes and data use requirements
Created
2016-10-19
216 commits to master branch, last one 2 years ago