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LLM-based ontological extraction tools, including SPIRES
Created
2023-01-03
1,435 commits to main branch, last one 14 hours ago
Repository for the Human Disease Ontology.
Created
2015-09-23
3,645 commits to main branch, last one 17 hours ago
Ontology for the description of human clinical features
Created
2015-08-19
8,007 commits to master branch, last one 2 days ago
ROBOT is an OBO Tool
Created
2015-01-31
2,299 commits to master branch, last one about a month ago
BFO repository including source code and latest documents
Created
2015-07-09
925 commits to master branch, last one 5 months ago
A Python frontend to (Open Biomedical) Ontologies.
Created
2016-07-01
829 commits to master branch, last one 2 months ago
Mondo Disease Ontology
Created
2017-09-20
11,633 commits to master branch, last one 14 hours ago
Source ontology files for the Gene Ontology
Created
2015-06-19
20,588 commits to master branch, last one 20 hours ago
Bootstrap an OBO Library ontology
Created
2015-12-15
2,040 commits to master branch, last one 3 days ago
The core repository for the FOODON food ontology project. This holds the key classes of the ontology; larger files and the results of text-mining projects will be stored in other repos.
Created
2016-03-17
1,327 commits to master branch, last one a day ago
Schema and generated objects for biolink data model and upper ontology
Created
2017-12-04
3,313 commits to master branch, last one about a month ago
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
Created
2015-07-29
4,316 commits to master branch, last one 17 hours ago
PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
Created
2018-09-22
1,983 commits to master branch, last one 2 months ago
Simple Standard for Sharing Ontology Mappings
Created
2020-04-15
341 commits to master branch, last one 11 days ago
An ontology of cell types
Created
2015-06-04
3,868 commits to master branch, last one a day ago
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
Created
2010-03-16
5,479 commits to master branch, last one 3 days ago
A community-driven ontology for the representation of environments
Created
2015-03-28
2,134 commits to master branch, last one 3 months ago
python library for working with ontologies and ontology associations
Created
2017-04-18
1,860 commits to master branch, last one 16 days ago
Ontology Access Kit: A python library and command line application for working with ontologies
Created
2022-03-28
594 commits to main branch, last one 8 days ago
Ontology Lookup Service from SPOT at EBI
This repository has been archived
(exclude archived)
Created
2014-11-03
838 commits to dev branch, last one about a year ago
Collect of SO Ontologies
Created
2015-06-17
210 commits to master branch, last one 22 days ago
RO is an ontology of relations for use with biological ontologies
Created
2015-07-03
1,260 commits to master branch, last one about a month ago
OBO Organized Knowledge: Training materials for becoming an OBO engineer
Created
2020-06-03
2,077 commits to master branch, last one 2 days ago
OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
Created
2019-01-26
561 commits to master branch, last one about a year ago
The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
Created
2015-08-19
1,859 commits to master branch, last one about a month ago
A system for managing OBO PURLs
Created
2014-11-26
2,120 commits to master branch, last one 2 days ago
The Ontology for Biomedical Investigations
Created
2017-02-27
1,741 commits to master branch, last one 11 days ago
information artifact ontology
Created
2015-07-31
915 commits to master branch, last one 2 months ago
Ontology for consent codes and data use requirements
Created
2016-10-19
216 commits to master branch, last one about a year ago
Basic and Advanced OBO Graphs: specification and reference implementation
Created
2016-08-27
157 commits to master branch, last one 7 months ago