4 results found Sort:

Lattice-Automation
seqviz Lattice-Automation
54
248
mit
13
a JavaScript DNA, RNA, and protein sequence viewer
dna rna igem vector biology plasmid protein synthetic-biology
Created 2019-04-24
767 commits to develop branch, last one about a month ago
smaegol
PlasFlow smaegol
28
98
gpl-3.0
8
Software for prediction of plasmid sequences in metagenomic assemblies
fasta contigs plasmid plasflow plasmids metagenome prediction tensorflow metagenomes classification plasmid-sequences metagenome-assembly
Created 2017-01-12
89 commits to master branch, last one 3 years ago
Shamir-Lab
Recycler Shamir-Lab
7
57
bsd-3-clause
9
This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halp...
denovo plasmid assembly recycler metagenomes assembly-graph circular-sequences
Created 2015-08-04
181 commits to master branch, last one 3 years ago
nekokoe
Plasmer nekokoe
3
40
mit
4
An accurate and sensitive bacterial plasmid identification tool based on deep machine-learning of shared k-mers and genomic features.
plasmid bioinformatics
Created 2022-08-16
140 commits to main branch, last one about a year ago