9 results found Sort:

Awesome Protein Representation Learning
Created 2022-10-05
69 commits to main branch, last one 3 months ago
GearNet and Geometric Pretraining Methods for Protein Structure Representation Learning, ICLR'2023 (https://arxiv.org/abs/2203.06125)
Created 2022-07-05
21 commits to main branch, last one about a year ago
Source code for "Learning protein sequence embeddings using information from structure" - ICLR 2019
Created 2019-02-22
7 commits to master branch, last one 3 years ago
Code for ICLR 2024 (Spotlight) paper "MAPE-PPI: Towards Effective and Efficient Protein-Protein Interaction Prediction via Microenvironment-Aware Protein Embedding"
Created 2024-01-24
9 commits to main branch, last one 8 months ago
ProtFlash: A lightweight protein language model
Created 2022-09-22
17 commits to main branch, last one 11 months ago
Code for Pre-training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction (https://arxiv.org/abs/2301.12068)
Created 2023-07-06
4 commits to main branch, last one about a year ago
ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models
Created 2024-02-13
25 commits to main branch, last one 2 months ago
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bsd-3-clause
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Protein Structure Transformer (PST): Endowing pretrained protein language models with structural knowledge
Created 2023-12-27
61 commits to main branch, last one about a year ago
Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein Interaction Prediction"
Created 2023-12-14
4 commits to main branch, last one 14 days ago