3 results found Sort:

ksahlin
strobealign ksahlin
17
149
mit
10
Aligns short reads using dynamic seed size with strobemers
illumina alignment strobemers bioinformatics short-read-mapping
Created 2021-05-23
1,664 commits to main branch, last one about a month ago
ksahlin
ultra ksahlin
10
60
unknown
4
Long-read splice alignment with high accuracy
alignment strobemers bioinformatics long-read-sequencing
Created 2019-08-20
698 commits to master branch, last one about a month ago
CMU-SAFARI
BLEND CMU-SAFARI
4
42
other
12
BLEND is a mechanism that can efficiently find fuzzy seed matches between sequences to significantly improve the performance and accuracy while reducing the memory space usage of two important applica...
blend minimizers strobemers fuzzy-seeds read-mapping spaced-seeds seed-matching bioinformatics genome-analysis genome-assembly de-novo-assembly read-overlapping
Created 2021-12-12
35 commits to master branch, last one about a year ago