3 results found Sort:

metagenome-atlas
atlas metagenome-atlas
98
377
bsd-3-clause
15
ATLAS - Three commands to start analyzing your metagenome data
assembly snakemake annotation metagenomics genomic-binning functional-annotation taxonomic-classifications
Created 2016-11-30
2,820 commits to main branch, last one 3 months ago
FOI-Bioinformatics
flextaxd FOI-Bioinformatics
8
65
gpl-3.0
3
FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )
16s gtdb ganon kraken2 amplicon centrifuge krakenuniq ncbi-database ncbi-taxonomy custom-database custom-taxonomy taxonomic-classification taxonomic-classifications metagenomic-classification
Created 2019-06-20
215 commits to master branch, last one 11 months ago
taxprofiler
taxpasta taxprofiler
7
34
apache-2.0
4
TAXnomic Profile Aggregation and STAndardisation
python profiling metagenomics bioinformatics classification standardisation taxonomic-profiling taxonomic-classifications metagenomic-classification
Created 2022-06-03
602 commits to dev branch, last one 15 days ago