9 results found Sort:

mims-harvard
TDC mims-harvard
174
1.0k
mit
26
Therapeutics Commons (TDC-2): Multimodal Foundation for Therapeutic Science
biology biotech datasets medicine chemistry benchmarks biomedicine therapeutics deep-learning bioinformatics drug-discovery cheminformatics machine-learning precision-medicine artificial-intelligence
Created 2020-09-17
1,227 commits to main branch, last one 9 days ago
cBioPortal
cbioportal cBioPortal
519
658
agpl-3.0
54
cBioPortal for Cancer Genomics
science visualization cancer-genomics precision-medicine
Created 2015-03-18
20,486 commits to master branch, last one a day ago
mims-harvard
PrimeKG mims-harvard
94
429
mit
15
Precision Medicine Knowledge Graph (PrimeKG)
dataset therapeutics bioinformatics knowledge-graph network-medicine precision-medicine nlp-machine-learning graph-machine-learning
Created 2022-04-18
66 commits to main branch, last one 5 months ago
mims-harvard
TxGNN mims-harvard
33
144
mit
5
TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design
drug-design therapeutics drug-discovery knowledge-graph precision-medicine graph-neural-networks geometric-deep-learning indications-and-warning
Created 2022-08-24
15 commits to main branch, last one 6 months ago
GenomicsDB
GenomicsDB GenomicsDB
17
95
other
11
High performance data storage for importing, querying and transforming variants.
cpp mpi gatk java scala spark variant genomics genomicsdb bioinformatics variant-calling precision-medicine
Created 2018-08-03
1,959 commits to master branch, last one about a month ago
drizopoulos
JMbayes2 drizopoulos
23
81
unknown
7
Extended Joint Models for Longitudinal and Survival Data
multi-state mixed-models competing-risks survival-models prediction-model precision-medicine longitudinal-analysis personalized-medicine
Created 2019-09-11
1,058 commits to master branch, last one 4 months ago
nt-williams
lmtp nt-williams
18
61
agpl-3.0
6
:package: Non-parametric Causal Effects Based on Modified Treatment Policies :crystal_ball:
statistics censored-data causal-inference machine-learning longitudinal-data robust-statistics survival-analysis targeted-learning precision-medicine nonparametric-statistics stochastic-interventions modified-treatment-policy
Created 2020-03-30
677 commits to master branch, last one 4 months ago
rhshah
IMPACT-Pipeline rhshah
9
55
apache-2.0
10
Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay
ngs mskimpact msk-impact cancer-genomics cancer-variants precision-medicine illumina-sequencing
Created 2015-07-29
144 commits to master branch, last one 3 years ago
poseidonchan
TAPE poseidonchan
9
48
gpl-3.0
3
Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)
rna-seq deep-learning bioinformatics machine-learning precision-medicine single-cell-analysis computational-biology cell-composition-analysis cell-type-specific-gene-expression-analysis
Created 2021-07-15
108 commits to main branch, last one about a year ago