3 results found Sort:

edgardomortiz
vcf2phylip edgardomortiz
86
301
gpl-3.0
9
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
vcf snps fasta nexus snapp binary phylip diploid haploid outgroup alignment polyploid vcf-files vcf-format convert-snps phylip-matrix phylogenetics phylogenetic-analysis
Created 2017-10-10
102 commits to master branch, last one about a year ago
tanghaibao
allhic tanghaibao
13
59
bsd-3-clause
4
Genome scaffolding based on HiC data in heterozygous and high ploidy genomes
hi-c golang contigs genomics lachesis pipeline polyploid heterozygous genome-assembly genetic-algorithm genome-scaffolding inter-contig-links
Created 2017-11-06
346 commits to main branch, last one 10 days ago
OmarOakheart
nPhase OmarOakheart
5
42
gpl-3.0
4
Ploidy agnostic phasing pipeline and algorithm
phasing polyploid bioinformatics bioinformatics-pipeline
Created 2020-03-30
142 commits to master branch, last one 12 months ago